PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05639
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 136aa    MW: 14972.7 Da    PI: 5.6537
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05639genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-171262155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+WvAeIr p     +  +r +lg+f +  +Aa+a+++a+++l+g
  PEQU_05639 12 CSYRGVRQRT-WGKWVAEIRMP-----NhgARLWLGTFNSSLDAARAYDHAARSLYG 62
                67*****999.**********9.....336***********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.28E-251272No hitNo description
PfamPF008472.1E-111262IPR001471AP2/ERF domain
SMARTSM003809.5E-291376IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-291371IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-201371IPR016177DNA-binding domain
PROSITE profilePS5103220.6661370IPR001471AP2/ERF domain
PRINTSPR003671.7E-91425IPR001471AP2/ERF domain
PRINTSPR003671.7E-93652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MKGKGGPENP SCSYRGVRQR TWGKWVAEIR MPNHGARLWL GTFNSSLDAA RAYDHAARSL  60
YGDCACLNLP HADLKTQRGG EESRKKEEEV VARFDGGMGL DDLEEFLMRL PKAEDFGLDV  120
FHDVGVAGRC GGDGDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-161470663ATERF1
3gcc_A2e-161470663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391184.12e-40PREDICTED: dehydration-responsive element-binding protein 2C-like
SwissprotQ84ZA17e-41DRE2C_ORYSJ; Dehydration-responsive element-binding protein 2C
TrEMBLA0A0D9XB062e-41A0A0D9XB06_9ORYZ; Uncharacterized protein
STRINGGSMUA_Achr3P00320_0017e-40(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55103454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.16e-34ERF family protein